Cluster: SPMP34_bin.59_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP34_bin.59
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_107534 | opera_contig_107534_46 | 52313 | 52927 | + | 9.B.27.2.5 |
| TC | opera_contig_107534 | opera_contig_107534_47 | 53039 | 54766 | + | 3.A.1.135.5 |
| TC | opera_contig_107534 | opera_contig_107534_48 | 54766 | 56619 | + | 3.A.1.135.5 |
| TF | opera_contig_107534 | opera_contig_107534_49 | 56627 | 57064 | + | MarR |
| CAZyme | opera_contig_107534 | opera_contig_107534_50 | 57061 | 58752 | + | GH2 |
| STP | opera_contig_107534 | opera_contig_107534_51 | 58769 | 59689 | + | PfkB |
| pfam | opera_contig_107534 | opera_contig_107534_52 | 59767 | 60438 | - | Hexapep | Mac | Hexapep_2 |
| TC | opera_contig_107534 | opera_contig_107534_53 | 60601 | 61557 | + | 3.A.1.132.9 |
| TC | opera_contig_107534 | opera_contig_107534_54 | 61541 | 62407 | + | 3.A.1.132.1 |
Gene ID: opera_contig_107534_46
Type: TC
Location: 52313 - 52927 (+)
Type: TC
Location: 52313 - 52927 (+)
Gene ID: opera_contig_107534_47
Type: TC
Location: 53039 - 54766 (+)
Type: TC
Location: 53039 - 54766 (+)
Gene ID: opera_contig_107534_48
Type: TC
Location: 54766 - 56619 (+)
Type: TC
Location: 54766 - 56619 (+)
Gene ID: opera_contig_107534_49
Type: TF
Location: 56627 - 57064 (+)
Type: TF
Location: 56627 - 57064 (+)
Gene ID: opera_contig_107534_50
Type: CAZyme
Location: 57061 - 58752 (+)
Type: CAZyme
Location: 57061 - 58752 (+)
Gene ID: opera_contig_107534_51
Type: STP
Location: 58769 - 59689 (+)
Type: STP
Location: 58769 - 59689 (+)
Gene ID: opera_contig_107534_52
Type: pfam
Location: 59767 - 60438 (-)
Type: pfam
Location: 59767 - 60438 (-)
Gene ID: opera_contig_107534_53
Type: TC
Location: 60601 - 61557 (+)
Type: TC
Location: 60601 - 61557 (+)
Gene ID: opera_contig_107534_54
Type: TC
Location: 61541 - 62407 (+)
Type: TC
Location: 61541 - 62407 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.