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Cluster: SPMP29_bin.72_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160540 opera_contig_160540_304 367144 368256 - GT28
TC opera_contig_160540 opera_contig_160540_305 368261 369448 - 2.A.103.1.3
pfam opera_contig_160540 opera_contig_160540_306 369475 370842 - Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC opera_contig_160540 opera_contig_160540_307 370862 371857 - 9.B.146.1.6
Gene ID: opera_contig_160540_304
Type: CAZyme
Location: 367144 - 368256 (-)
Gene ID: opera_contig_160540_305
Type: TC
Location: 368261 - 369448 (-)
Gene ID: opera_contig_160540_306
Type: pfam
Location: 369475 - 370842 (-)
Gene ID: opera_contig_160540_307
Type: TC
Location: 370862 - 371857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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