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Cluster: SPMP28_bin.12_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_254439 opera_contig_254439_214 287215 288666 + 2.A.38.1.3
NULL(UNKNOWN) opera_contig_254439 opera_contig_254439_215 288792 289139 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_254439 opera_contig_254439_216 289217 289567 + 3.D.1.8.1
TC opera_contig_254439 opera_contig_254439_217 289558 290145 + 3.D.1.3.1
TC opera_contig_254439 opera_contig_254439_218 290142 291650 + 3.D.1.5.1
TC opera_contig_254439 opera_contig_254439_219 291604 291825 + 3.D.1.6.4
TC opera_contig_254439 opera_contig_254439_220 291890 292966 + 3.D.1.5.1
STP opera_contig_254439 opera_contig_254439_221 292966 293469 + Fer4 | Fer4
pfam opera_contig_254439 opera_contig_254439_222 293600 293929 + Oxidored_q3
TC opera_contig_254439 opera_contig_254439_223 293935 294243 + 3.D.1.2.1
TC opera_contig_254439 opera_contig_254439_224 294237 296165 + 3.D.9.1.1
TC opera_contig_254439 opera_contig_254439_225 296235 297722 + 3.D.1.5.1
TC opera_contig_254439 opera_contig_254439_226 297777 299216 + 3.D.1.8.1
TF opera_contig_254439 opera_contig_254439_227 299597 300466 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) opera_contig_254439 opera_contig_254439_228 300915 301073 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_254439 opera_contig_254439_229 301289 303391 - CBM91 | GH43_10
CAZyme opera_contig_254439 opera_contig_254439_230 303422 305785 - GH3
Gene ID: opera_contig_254439_214
Type: TC
Location: 287215 - 288666 (+)
Gene ID: opera_contig_254439_215
Type:
Location: 288792 - 289139 (+)
Gene ID: opera_contig_254439_216
Type: TC
Location: 289217 - 289567 (+)
Gene ID: opera_contig_254439_217
Type: TC
Location: 289558 - 290145 (+)
Gene ID: opera_contig_254439_218
Type: TC
Location: 290142 - 291650 (+)
Gene ID: opera_contig_254439_219
Type: TC
Location: 291604 - 291825 (+)
Gene ID: opera_contig_254439_220
Type: TC
Location: 291890 - 292966 (+)
Gene ID: opera_contig_254439_221
Type: STP
Location: 292966 - 293469 (+)
Gene ID: opera_contig_254439_222
Type: pfam
Location: 293600 - 293929 (+)
Gene ID: opera_contig_254439_223
Type: TC
Location: 293935 - 294243 (+)
Gene ID: opera_contig_254439_224
Type: TC
Location: 294237 - 296165 (+)
Gene ID: opera_contig_254439_225
Type: TC
Location: 296235 - 297722 (+)
Gene ID: opera_contig_254439_226
Type: TC
Location: 297777 - 299216 (+)
Gene ID: opera_contig_254439_227
Type: TF
Location: 299597 - 300466 (-)
Gene ID: opera_contig_254439_228
Type:
Location: 300915 - 301073 (+)
Gene ID: opera_contig_254439_229
Type: CAZyme
Location: 301289 - 303391 (-)
Gene ID: opera_contig_254439_230
Type: CAZyme
Location: 303422 - 305785 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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