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Cluster: SPMP28_bin.12_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_254443 opera_contig_254443_144 169775 171499 + CBM32 | GH43_28
CAZyme opera_contig_254443 opera_contig_254443_145 171512 172924 + CBM6 | GH43_16
CAZyme opera_contig_254443 opera_contig_254443_146 172974 174329 + CBM6 | GH43_29
CAZyme opera_contig_254443 opera_contig_254443_147 174351 175709 + CBM6 | GH43_29
CAZyme opera_contig_254443 opera_contig_254443_148 175750 177831 + CBM91 | GH43_10
pfam opera_contig_254443 opera_contig_254443_149 177976 179010 + tRNA-synt_2d | Phe_tRNA-synt_N
TC opera_contig_254443 opera_contig_254443_150 179206 180402 + 2.A.1.46.5
Gene ID: opera_contig_254443_144
Type: CAZyme
Location: 169775 - 171499 (+)
Gene ID: opera_contig_254443_145
Type: CAZyme
Location: 171512 - 172924 (+)
Gene ID: opera_contig_254443_146
Type: CAZyme
Location: 172974 - 174329 (+)
Gene ID: opera_contig_254443_147
Type: CAZyme
Location: 174351 - 175709 (+)
Gene ID: opera_contig_254443_148
Type: CAZyme
Location: 175750 - 177831 (+)
Gene ID: opera_contig_254443_149
Type: pfam
Location: 177976 - 179010 (+)
Gene ID: opera_contig_254443_150
Type: TC
Location: 179206 - 180402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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