Cluster: SPMP28_bin.12_CGC54
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP28_bin.12
- CGC Family ID: CGCFAM_01620
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_254442 | opera_contig_254442_278 | 334210 | 334944 | - | GT51 |
| TC | opera_contig_254442 | opera_contig_254442_279 | 334993 | 335667 | - | 9.B.186.1.3 |
| TC | opera_contig_254442 | opera_contig_254442_280 | 335761 | 337089 | - | 2.A.66.1.13 |
| CAZyme | opera_contig_254442 | opera_contig_254442_281 | 337106 | 338272 | - | CE9 |
| TC | opera_contig_254442 | opera_contig_254442_282 | 338310 | 339644 | - | 3.A.1.11.2 |
| TC | opera_contig_254442 | opera_contig_254442_283 | 339679 | 340470 | - | 3.A.1.11.8 |
| TC | opera_contig_254442 | opera_contig_254442_284 | 340467 | 341267 | - | 3.A.1.11.8 |
| TC | opera_contig_254442 | opera_contig_254442_285 | 341290 | 342687 | - | 3.A.1.11.8 |
| sulfatase | opera_contig_254442 | opera_contig_254442_286 | 342880 | 343641 | + | S1_2 |
| STP | opera_contig_254442 | opera_contig_254442_287 | 343823 | 344536 | + | TPR_1 |
| CAZyme | opera_contig_254442 | opera_contig_254442_288 | 344614 | 346623 | - | GH13_8 |
Gene ID: opera_contig_254442_278
Type: CAZyme
Location: 334210 - 334944 (-)
Type: CAZyme
Location: 334210 - 334944 (-)
Gene ID: opera_contig_254442_279
Type: TC
Location: 334993 - 335667 (-)
Type: TC
Location: 334993 - 335667 (-)
Gene ID: opera_contig_254442_280
Type: TC
Location: 335761 - 337089 (-)
Type: TC
Location: 335761 - 337089 (-)
Gene ID: opera_contig_254442_281
Type: CAZyme
Location: 337106 - 338272 (-)
Type: CAZyme
Location: 337106 - 338272 (-)
Gene ID: opera_contig_254442_282
Type: TC
Location: 338310 - 339644 (-)
Type: TC
Location: 338310 - 339644 (-)
Gene ID: opera_contig_254442_283
Type: TC
Location: 339679 - 340470 (-)
Type: TC
Location: 339679 - 340470 (-)
Gene ID: opera_contig_254442_284
Type: TC
Location: 340467 - 341267 (-)
Type: TC
Location: 340467 - 341267 (-)
Gene ID: opera_contig_254442_285
Type: TC
Location: 341290 - 342687 (-)
Type: TC
Location: 341290 - 342687 (-)
Gene ID: opera_contig_254442_286
Type: sulfatase
Location: 342880 - 343641 (+)
Type: sulfatase
Location: 342880 - 343641 (+)
Gene ID: opera_contig_254442_287
Type: STP
Location: 343823 - 344536 (+)
Type: STP
Location: 343823 - 344536 (+)
Gene ID: opera_contig_254442_288
Type: CAZyme
Location: 344614 - 346623 (-)
Type: CAZyme
Location: 344614 - 346623 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides propionicigenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.