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Cluster: SPMP28_bin.12_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_254442 opera_contig_254442_265 318930 320099 - 9.B.169.1.1
CAZyme opera_contig_254442 opera_contig_254442_266 320320 322983 + GH3
TF opera_contig_254442 opera_contig_254442_267 323366 324067 - LytTR
pfam opera_contig_254442 opera_contig_254442_268 324069 325136 - His_kinase
TC opera_contig_254442 opera_contig_254442_269 325166 326386 - 3.A.1.122.1
TC opera_contig_254442 opera_contig_254442_270 326433 327179 - 3.A.1.122.2
TC opera_contig_254442 opera_contig_254442_271 327207 328430 - 8.A.1.2.2
TC opera_contig_254442 opera_contig_254442_272 328496 329875 - 3.A.1.109.5
pfam opera_contig_254442 opera_contig_254442_273 330091 330312 + DUF4492
TC opera_contig_254442 opera_contig_254442_274 330367 331920 + 3.D.4.3.2
Gene ID: opera_contig_254442_265
Type: TC
Location: 318930 - 320099 (-)
Gene ID: opera_contig_254442_266
Type: CAZyme
Location: 320320 - 322983 (+)
Gene ID: opera_contig_254442_267
Type: TF
Location: 323366 - 324067 (-)
Gene ID: opera_contig_254442_268
Type: pfam
Location: 324069 - 325136 (-)
Gene ID: opera_contig_254442_269
Type: TC
Location: 325166 - 326386 (-)
Gene ID: opera_contig_254442_270
Type: TC
Location: 326433 - 327179 (-)
Gene ID: opera_contig_254442_271
Type: TC
Location: 327207 - 328430 (-)
Gene ID: opera_contig_254442_272
Type: TC
Location: 328496 - 329875 (-)
Gene ID: opera_contig_254442_273
Type: pfam
Location: 330091 - 330312 (+)
Gene ID: opera_contig_254442_274
Type: TC
Location: 330367 - 331920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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