Cluster: SPMP28_bin.12_CGC50
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP28_bin.12
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_254442 | opera_contig_254442_109 | 136915 | 137808 | + | 8.A.5.1.4 |
| NULL(UNKNOWN) | opera_contig_254442 | opera_contig_254442_110 | 137805 | 138719 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_254442 | opera_contig_254442_111 | 138946 | 140079 | + | PS_pyruv_trans |
| CAZyme | opera_contig_254442 | opera_contig_254442_112 | 140098 | 140835 | + | GT32 |
| NULL(UNKNOWN) | opera_contig_254442 | opera_contig_254442_113 | 140853 | 142154 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_254442 | opera_contig_254442_114 | 142117 | 143364 | + | GT4 |
| CAZyme | opera_contig_254442 | opera_contig_254442_115 | 143381 | 144643 | + | GT4 |
| CAZyme | opera_contig_254442 | opera_contig_254442_116 | 144646 | 145725 | + | GT4 |
Gene ID: opera_contig_254442_109
Type: TC
Location: 136915 - 137808 (+)
Type: TC
Location: 136915 - 137808 (+)
Gene ID: opera_contig_254442_110
Type:
Location: 137805 - 138719 (+)
Type:
Location: 137805 - 138719 (+)
Gene ID: opera_contig_254442_111
Type: pfam
Location: 138946 - 140079 (+)
Type: pfam
Location: 138946 - 140079 (+)
Gene ID: opera_contig_254442_112
Type: CAZyme
Location: 140098 - 140835 (+)
Type: CAZyme
Location: 140098 - 140835 (+)
Gene ID: opera_contig_254442_113
Type:
Location: 140853 - 142154 (+)
Type:
Location: 140853 - 142154 (+)
Gene ID: opera_contig_254442_114
Type: CAZyme
Location: 142117 - 143364 (+)
Type: CAZyme
Location: 142117 - 143364 (+)
Gene ID: opera_contig_254442_115
Type: CAZyme
Location: 143381 - 144643 (+)
Type: CAZyme
Location: 143381 - 144643 (+)
Gene ID: opera_contig_254442_116
Type: CAZyme
Location: 144646 - 145725 (+)
Type: CAZyme
Location: 144646 - 145725 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides propionicigenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.