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Cluster: SPMP28_bin.12_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_254441 opera_contig_254441_293 346990 347367 + 1.A.43.1.1
pfam opera_contig_254441 opera_contig_254441_294 347440 348720 + Enolase_C | Enolase_N | MR_MLE_C
pfam opera_contig_254441 opera_contig_254441_295 349086 349613 + DUF4199
CAZyme opera_contig_254441 opera_contig_254441_296 349678 350631 + GT2
pfam opera_contig_254441 opera_contig_254441_297 350634 351119 + DUF6452
pfam opera_contig_254441 opera_contig_254441_298 351088 351855 + DUF6048
TC opera_contig_254441 opera_contig_254441_299 351860 352441 + 2.A.107.1.2
pfam opera_contig_254441 opera_contig_254441_300 352503 353525 + ApbE
TC opera_contig_254441 opera_contig_254441_301 353722 354090 - 2.A.7.34.3
Gene ID: opera_contig_254441_293
Type: TC
Location: 346990 - 347367 (+)
Gene ID: opera_contig_254441_294
Type: pfam
Location: 347440 - 348720 (+)
Gene ID: opera_contig_254441_295
Type: pfam
Location: 349086 - 349613 (+)
Gene ID: opera_contig_254441_296
Type: CAZyme
Location: 349678 - 350631 (+)
Gene ID: opera_contig_254441_297
Type: pfam
Location: 350634 - 351119 (+)
Gene ID: opera_contig_254441_298
Type: pfam
Location: 351088 - 351855 (+)
Gene ID: opera_contig_254441_299
Type: TC
Location: 351860 - 352441 (+)
Gene ID: opera_contig_254441_300
Type: pfam
Location: 352503 - 353525 (+)
Gene ID: opera_contig_254441_301
Type: TC
Location: 353722 - 354090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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