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Cluster: SPMP28_bin.12_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_254439 opera_contig_254439_185 236634 238235 + GH28
pfam opera_contig_254439 opera_contig_254439_186 238344 239573 + DUF4861
CAZyme opera_contig_254439 opera_contig_254439_187 239605 241281 + CBM91 | GH43_10
pfam opera_contig_254439 opera_contig_254439_188 241336 241998 + Hydrolase | Hydrolase_like | HAD_2
CAZyme opera_contig_254439 opera_contig_254439_189 241967 244354 - PL1_2
TC opera_contig_254439 opera_contig_254439_190 244644 247967 + 1.B.14.6.1
TC opera_contig_254439 opera_contig_254439_191 247989 250058 + 8.A.46.1.3
Gene ID: opera_contig_254439_185
Type: CAZyme
Location: 236634 - 238235 (+)
Gene ID: opera_contig_254439_186
Type: pfam
Location: 238344 - 239573 (+)
Gene ID: opera_contig_254439_187
Type: CAZyme
Location: 239605 - 241281 (+)
Gene ID: opera_contig_254439_188
Type: pfam
Location: 241336 - 241998 (+)
Gene ID: opera_contig_254439_189
Type: CAZyme
Location: 241967 - 244354 (-)
Gene ID: opera_contig_254439_190
Type: TC
Location: 244644 - 247967 (+)
Gene ID: opera_contig_254439_191
Type: TC
Location: 247989 - 250058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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