dbCAN Logo

Cluster: SPMP28_bin.12_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_254440 opera_contig_254440_337 424087 424680 - 9.B.18.1.2
CAZyme opera_contig_254440 opera_contig_254440_338 424685 425461 - GT2
CAZyme opera_contig_254440 opera_contig_254440_339 425784 426863 - GT4
pfam opera_contig_254440 opera_contig_254440_340 427279 427869 - Acyl_transf_3
CAZyme opera_contig_254440 opera_contig_254440_341 427866 428900 - GT4
pfam opera_contig_254440 opera_contig_254440_342 428903 429814 - C5-epim_C
CAZyme opera_contig_254440 opera_contig_254440_343 429805 430893 - GT4
Gene ID: opera_contig_254440_337
Type: TC
Location: 424087 - 424680 (-)
Gene ID: opera_contig_254440_338
Type: CAZyme
Location: 424685 - 425461 (-)
Gene ID: opera_contig_254440_339
Type: CAZyme
Location: 425784 - 426863 (-)
Gene ID: opera_contig_254440_340
Type: pfam
Location: 427279 - 427869 (-)
Gene ID: opera_contig_254440_341
Type: CAZyme
Location: 427866 - 428900 (-)
Gene ID: opera_contig_254440_342
Type: pfam
Location: 428903 - 429814 (-)
Gene ID: opera_contig_254440_343
Type: CAZyme
Location: 429805 - 430893 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List