Cluster: SPMP28_bin.12_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP28_bin.12
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_254439 | opera_contig_254439_1376 | 1711429 | 1714614 | + | 1.B.14.6.1 |
| TC | opera_contig_254439 | opera_contig_254439_1377 | 1714636 | 1716309 | + | 8.A.46.1.3 |
| CAZyme | opera_contig_254439 | opera_contig_254439_1378 | 1716510 | 1717799 | + | GH88 |
| CAZyme | opera_contig_254439 | opera_contig_254439_1379 | 1717818 | 1719818 | + | PL12_2 |
| pfam | opera_contig_254439 | opera_contig_254439_1380 | 1719917 | 1720546 | + | Cytidylate_kin2 |
| TC | opera_contig_254439 | opera_contig_254439_1381 | 1720674 | 1722335 | - | 2.A.81.1.2 |
Gene ID: opera_contig_254439_1376
Type: TC
Location: 1711429 - 1714614 (+)
Type: TC
Location: 1711429 - 1714614 (+)
Gene ID: opera_contig_254439_1377
Type: TC
Location: 1714636 - 1716309 (+)
Type: TC
Location: 1714636 - 1716309 (+)
Gene ID: opera_contig_254439_1378
Type: CAZyme
Location: 1716510 - 1717799 (+)
Type: CAZyme
Location: 1716510 - 1717799 (+)
Gene ID: opera_contig_254439_1379
Type: CAZyme
Location: 1717818 - 1719818 (+)
Type: CAZyme
Location: 1717818 - 1719818 (+)
Gene ID: opera_contig_254439_1380
Type: pfam
Location: 1719917 - 1720546 (+)
Type: pfam
Location: 1719917 - 1720546 (+)
Gene ID: opera_contig_254439_1381
Type: TC
Location: 1720674 - 1722335 (-)
Type: TC
Location: 1720674 - 1722335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides propionicigenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.