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Cluster: SPMP28_bin.12_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_254439 opera_contig_254439_882 1082608 1084809 + 3.A.10.1.10
CAZyme opera_contig_254439 opera_contig_254439_883 1085028 1086965 - GH63
CAZyme opera_contig_254439 opera_contig_254439_884 1086981 1090133 - GH2
TC opera_contig_254439 opera_contig_254439_885 1090153 1090758 - 2.A.124.1.2
TC opera_contig_254439 opera_contig_254439_886 1090755 1091033 - 2.A.124.1.2
pfam opera_contig_254439 opera_contig_254439_887 1091156 1092757 - SusD_RagB | SusD-like_3
TC opera_contig_254439 opera_contig_254439_888 1092787 1095909 - 1.B.14.6.1
Gene ID: opera_contig_254439_882
Type: TC
Location: 1082608 - 1084809 (+)
Gene ID: opera_contig_254439_883
Type: CAZyme
Location: 1085028 - 1086965 (-)
Gene ID: opera_contig_254439_884
Type: CAZyme
Location: 1086981 - 1090133 (-)
Gene ID: opera_contig_254439_885
Type: TC
Location: 1090153 - 1090758 (-)
Gene ID: opera_contig_254439_886
Type: TC
Location: 1090755 - 1091033 (-)
Gene ID: opera_contig_254439_887
Type: pfam
Location: 1091156 - 1092757 (-)
Gene ID: opera_contig_254439_888
Type: TC
Location: 1092787 - 1095909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_254439_886 vegan > omnivore 1.65145 0.01547

🧭 Explore Read Mapping of CGC

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