dbCAN Logo

Cluster: SPMP21_bin.40_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_24 opera_contig_24_62 67538 68731 + GH3
pfam opera_contig_24 opera_contig_24_63 68728 69450 + DNA_alkylation
TC opera_contig_24 opera_contig_24_64 69678 71537 - 3.A.1.11.7
TC opera_contig_24 opera_contig_24_65 71537 72388 - 3.A.1.11.2
TC opera_contig_24 opera_contig_24_66 72385 73452 - 3.A.1.11.7
Gene ID: opera_contig_24_62
Type: CAZyme
Location: 67538 - 68731 (+)
Gene ID: opera_contig_24_63
Type: pfam
Location: 68728 - 69450 (+)
Gene ID: opera_contig_24_64
Type: TC
Location: 69678 - 71537 (-)
Gene ID: opera_contig_24_65
Type: TC
Location: 71537 - 72388 (-)
Gene ID: opera_contig_24_66
Type: TC
Location: 72385 - 73452 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List