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Cluster: SPMP19_bin.54_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160010 opera_contig_160010_103 112804 114165 - 2.A.66.1.32
pfam opera_contig_160010 opera_contig_160010_104 114204 114668 - GtrA_DPMS_TM
pfam opera_contig_160010 opera_contig_160010_105 114810 115907 - Methyltransf_5
TC opera_contig_160010 opera_contig_160010_106 116059 118689 - 4.A.2.1.17
pfam opera_contig_160010 opera_contig_160010_107 118961 119839 + Aldose_epim
CAZyme opera_contig_160010 opera_contig_160010_108 119929 122109 - GH36
TC opera_contig_160010 opera_contig_160010_109 122137 122979 - 3.A.1.1.28
TC opera_contig_160010 opera_contig_160010_110 122979 123857 - 3.A.1.1.28
TC opera_contig_160010 opera_contig_160010_111 123860 125155 - 3.A.1.1.28
Gene ID: opera_contig_160010_103
Type: TC
Location: 112804 - 114165 (-)
Gene ID: opera_contig_160010_104
Type: pfam
Location: 114204 - 114668 (-)
Gene ID: opera_contig_160010_105
Type: pfam
Location: 114810 - 115907 (-)
Gene ID: opera_contig_160010_106
Type: TC
Location: 116059 - 118689 (-)
Gene ID: opera_contig_160010_107
Type: pfam
Location: 118961 - 119839 (+)
Gene ID: opera_contig_160010_108
Type: CAZyme
Location: 119929 - 122109 (-)
Gene ID: opera_contig_160010_109
Type: TC
Location: 122137 - 122979 (-)
Gene ID: opera_contig_160010_110
Type: TC
Location: 122979 - 123857 (-)
Gene ID: opera_contig_160010_111
Type: TC
Location: 123860 - 125155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160010_103 vegan > omnivore 1.01337 0.01389
opera_contig_160010_109 vegan > omnivore 1.03647 0.01389

🧭 Explore Read Mapping of CGC

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