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Cluster: SPMP19_bin.54_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160009 opera_contig_160009_427 479385 481211 - 8.A.59.2.1
STP opera_contig_160009 opera_contig_160009_428 481458 482693 + SBP_bac_1
TC opera_contig_160009 opera_contig_160009_429 482772 483650 + 3.A.1.1.41
TC opera_contig_160009 opera_contig_160009_430 483662 484516 + 3.A.1.1.17
CAZyme opera_contig_160009 opera_contig_160009_431 484558 485667 + GH172
Gene ID: opera_contig_160009_427
Type: TC
Location: 479385 - 481211 (-)
Gene ID: opera_contig_160009_428
Type: STP
Location: 481458 - 482693 (+)
Gene ID: opera_contig_160009_429
Type: TC
Location: 482772 - 483650 (+)
Gene ID: opera_contig_160009_430
Type: TC
Location: 483662 - 484516 (+)
Gene ID: opera_contig_160009_431
Type: CAZyme
Location: 484558 - 485667 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160009_427 vegan > omnivore 1.29220 0.01389
opera_contig_160009_428 vegan > omnivore 1.94140 0.01389
opera_contig_160009_429 vegan > omnivore 1.40880 0.01389
opera_contig_160009_430 vegan > omnivore 1.77183 0.01389
opera_contig_160009_431 vegan > omnivore 1.30975 0.01389

🧭 Explore Read Mapping of CGC

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