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Cluster: SPMP19_bin.54_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160009 opera_contig_160009_417 466925 468154 + 3.A.1.1.7
TC opera_contig_160009 opera_contig_160009_418 468334 469212 + 3.A.1.1.37
TC opera_contig_160009 opera_contig_160009_419 469263 470093 + 3.A.1.1.25
CAZyme opera_contig_160009 opera_contig_160009_420 470112 471602 + GH32
CAZyme opera_contig_160009 opera_contig_160009_421 471659 472996 + GH91
Gene ID: opera_contig_160009_417
Type: TC
Location: 466925 - 468154 (+)
Gene ID: opera_contig_160009_418
Type: TC
Location: 468334 - 469212 (+)
Gene ID: opera_contig_160009_419
Type: TC
Location: 469263 - 470093 (+)
Gene ID: opera_contig_160009_420
Type: CAZyme
Location: 470112 - 471602 (+)
Gene ID: opera_contig_160009_421
Type: CAZyme
Location: 471659 - 472996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160009_417 vegan > omnivore 3.24966 0.01389
opera_contig_160009_418 vegan > omnivore 3.60710 0.01389
opera_contig_160009_419 vegan > omnivore 3.73981 0.01389
opera_contig_160009_420 vegan > omnivore 4.03960 0.01389
opera_contig_160009_421 vegan > omnivore 3.20039 0.01389

🧭 Explore Read Mapping of CGC

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