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Cluster: SPMP19_bin.54_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160009 opera_contig_160009_404 448302 449753 + 2.A.25.1.4
peptidase opera_contig_160009 opera_contig_160009_405 449757 451367 + M38.UNW
TF opera_contig_160009 opera_contig_160009_406 451643 452506 - HTH_AraC | HTH_AraC
CAZyme opera_contig_160009 opera_contig_160009_407 452706 455744 + GH2
TC opera_contig_160009 opera_contig_160009_408 455914 457311 + 2.A.2.3.3
Gene ID: opera_contig_160009_404
Type: TC
Location: 448302 - 449753 (+)
Gene ID: opera_contig_160009_405
Type: peptidase
Location: 449757 - 451367 (+)
Gene ID: opera_contig_160009_406
Type: TF
Location: 451643 - 452506 (-)
Gene ID: opera_contig_160009_407
Type: CAZyme
Location: 452706 - 455744 (+)
Gene ID: opera_contig_160009_408
Type: TC
Location: 455914 - 457311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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