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Cluster: SPMP19_bin.54_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160021 opera_contig_160021_63 51014 53533 + GH2
TC opera_contig_160021 opera_contig_160021_64 53660 55072 - 2.A.25.1.4
TF opera_contig_160021 opera_contig_160021_65 55352 56251 - HTH_1
TC opera_contig_160021 opera_contig_160021_66 56583 57848 + 2.A.47.5.2
pfam opera_contig_160021 opera_contig_160021_67 58066 58971 + Fumerase
pfam opera_contig_160021 opera_contig_160021_68 58992 59624 + Fumerase_C
TC opera_contig_160021 opera_contig_160021_69 59966 60607 + 2.A.115.2.12
Gene ID: opera_contig_160021_63
Type: CAZyme
Location: 51014 - 53533 (+)
Gene ID: opera_contig_160021_64
Type: TC
Location: 53660 - 55072 (-)
Gene ID: opera_contig_160021_65
Type: TF
Location: 55352 - 56251 (-)
Gene ID: opera_contig_160021_66
Type: TC
Location: 56583 - 57848 (+)
Gene ID: opera_contig_160021_67
Type: pfam
Location: 58066 - 58971 (+)
Gene ID: opera_contig_160021_68
Type: pfam
Location: 58992 - 59624 (+)
Gene ID: opera_contig_160021_69
Type: TC
Location: 59966 - 60607 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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