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Cluster: SPMP19_bin.54_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160020 opera_contig_160020_47 48333 49424 - 9.A.23.1.1
STP opera_contig_160020 opera_contig_160020_48 49474 50598 - Fer4
TF opera_contig_160020 opera_contig_160020_49 50961 51806 + HTH_AraC | HTH_AraC
CAZyme opera_contig_160020 opera_contig_160020_50 51822 53456 - GH36
Gene ID: opera_contig_160020_47
Type: TC
Location: 48333 - 49424 (-)
Gene ID: opera_contig_160020_48
Type: STP
Location: 49474 - 50598 (-)
Gene ID: opera_contig_160020_49
Type: TF
Location: 50961 - 51806 (+)
Gene ID: opera_contig_160020_50
Type: CAZyme
Location: 51822 - 53456 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160020_48 vegan > omnivore 1.06605 0.01389

🧭 Explore Read Mapping of CGC

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