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Cluster: SPMP19_bin.54_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160017 opera_contig_160017_101 124279 124974 + 3.A.1.8.1
TC opera_contig_160017 opera_contig_160017_102 124974 126023 + 3.A.1.10.3
TF opera_contig_160017 opera_contig_160017_103 126108 127196 - 0037176
TC opera_contig_160017 opera_contig_160017_104 127301 128416 - 3.A.1.1.26
TF opera_contig_160017 opera_contig_160017_105 128747 129205 + FUR
pfam opera_contig_160017 opera_contig_160017_106 129465 129806 + DUF6110
TC opera_contig_160017 opera_contig_160017_107 129821 131896 + 3.A.3.32.3
TF opera_contig_160017 opera_contig_160017_108 132077 133024 - HTH_AraC
CAZyme opera_contig_160017 opera_contig_160017_109 133281 135398 + GH36
TC opera_contig_160017 opera_contig_160017_110 135540 136733 - 2.A.1.2.65
Gene ID: opera_contig_160017_101
Type: TC
Location: 124279 - 124974 (+)
Gene ID: opera_contig_160017_102
Type: TC
Location: 124974 - 126023 (+)
Gene ID: opera_contig_160017_103
Type: TF
Location: 126108 - 127196 (-)
Gene ID: opera_contig_160017_104
Type: TC
Location: 127301 - 128416 (-)
Gene ID: opera_contig_160017_105
Type: TF
Location: 128747 - 129205 (+)
Gene ID: opera_contig_160017_106
Type: pfam
Location: 129465 - 129806 (+)
Gene ID: opera_contig_160017_107
Type: TC
Location: 129821 - 131896 (+)
Gene ID: opera_contig_160017_108
Type: TF
Location: 132077 - 133024 (-)
Gene ID: opera_contig_160017_109
Type: CAZyme
Location: 133281 - 135398 (+)
Gene ID: opera_contig_160017_110
Type: TC
Location: 135540 - 136733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160017_106 vegan > omnivore 1.00317 0.01389
opera_contig_160017_110 vegan > omnivore 1.17497 0.01389
opera_contig_160017_110 vegetarian > omnivore 1.26495 0.04116

🧭 Explore Read Mapping of CGC

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