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Cluster: SPMP19_bin.54_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160017 opera_contig_160017_74 82107 82913 + 3.A.1.104.1
TC opera_contig_160017 opera_contig_160017_75 83046 84368 + 3.A.1.103.6
CAZyme opera_contig_160017 opera_contig_160017_76 84383 90022 + GT2 | GT4 | GT4
CAZyme opera_contig_160017 opera_contig_160017_77 89998 92445 + GT2 | GT2
NULL(UNKNOWN) opera_contig_160017 opera_contig_160017_78 92457 93896 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase opera_contig_160017 opera_contig_160017_79 94005 95252 - S11.UNW
CAZyme opera_contig_160017 opera_contig_160017_80 95434 97293 + GT2 | GT2
CAZyme opera_contig_160017 opera_contig_160017_81 97298 98254 + GT2
TC opera_contig_160017 opera_contig_160017_82 98363 99766 + 9.B.18.1.1
pfam opera_contig_160017 opera_contig_160017_83 99785 101137 + LytR_cpsA_psr
CAZyme opera_contig_160017 opera_contig_160017_84 101209 102138 + GT2
Gene ID: opera_contig_160017_74
Type: TC
Location: 82107 - 82913 (+)
Gene ID: opera_contig_160017_75
Type: TC
Location: 83046 - 84368 (+)
Gene ID: opera_contig_160017_76
Type: CAZyme
Location: 84383 - 90022 (+)
Gene ID: opera_contig_160017_77
Type: CAZyme
Location: 89998 - 92445 (+)
Gene ID: opera_contig_160017_78
Type:
Location: 92457 - 93896 (+)
Gene ID: opera_contig_160017_79
Type: peptidase
Location: 94005 - 95252 (-)
Gene ID: opera_contig_160017_80
Type: CAZyme
Location: 95434 - 97293 (+)
Gene ID: opera_contig_160017_81
Type: CAZyme
Location: 97298 - 98254 (+)
Gene ID: opera_contig_160017_82
Type: TC
Location: 98363 - 99766 (+)
Gene ID: opera_contig_160017_83
Type: pfam
Location: 99785 - 101137 (+)
Gene ID: opera_contig_160017_84
Type: CAZyme
Location: 101209 - 102138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160017_84 vegetarian > omnivore 1.02076 0.02755

🧭 Explore Read Mapping of CGC

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