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Cluster: SPMP19_bin.54_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160014 opera_contig_160014_192 209303 210040 - 3.A.1.103.5
TC opera_contig_160014 opera_contig_160014_193 210053 211015 - 3.A.1.103.1
pfam opera_contig_160014 opera_contig_160014_194 210969 212363 - Enolase_C | Enolase_N
pfam opera_contig_160014 opera_contig_160014_195 212753 213244 + DUF2798
TC opera_contig_160014 opera_contig_160014_196 213370 214701 - 2.A.66.1.33
pfam opera_contig_160014 opera_contig_160014_197 214713 215702 - RelA_SpoT
peptidase opera_contig_160014 opera_contig_160014_198 215786 216646 - S09.UPW
CAZyme opera_contig_160014 opera_contig_160014_199 216989 219151 - GH112
pfam opera_contig_160014 opera_contig_160014_200 219185 220300 - APH
CAZyme opera_contig_160014 opera_contig_160014_201 220390 222414 - GH42
TC opera_contig_160014 opera_contig_160014_202 222587 223417 - 3.A.1.1.4
TC opera_contig_160014 opera_contig_160014_203 223410 224309 - 3.A.1.1.4
TC opera_contig_160014 opera_contig_160014_204 224400 225689 - 3.A.1.1.4
Gene ID: opera_contig_160014_192
Type: TC
Location: 209303 - 210040 (-)
Gene ID: opera_contig_160014_193
Type: TC
Location: 210053 - 211015 (-)
Gene ID: opera_contig_160014_194
Type: pfam
Location: 210969 - 212363 (-)
Gene ID: opera_contig_160014_195
Type: pfam
Location: 212753 - 213244 (+)
Gene ID: opera_contig_160014_196
Type: TC
Location: 213370 - 214701 (-)
Gene ID: opera_contig_160014_197
Type: pfam
Location: 214713 - 215702 (-)
Gene ID: opera_contig_160014_198
Type: peptidase
Location: 215786 - 216646 (-)
Gene ID: opera_contig_160014_199
Type: CAZyme
Location: 216989 - 219151 (-)
Gene ID: opera_contig_160014_200
Type: pfam
Location: 219185 - 220300 (-)
Gene ID: opera_contig_160014_201
Type: CAZyme
Location: 220390 - 222414 (-)
Gene ID: opera_contig_160014_202
Type: TC
Location: 222587 - 223417 (-)
Gene ID: opera_contig_160014_203
Type: TC
Location: 223410 - 224309 (-)
Gene ID: opera_contig_160014_204
Type: TC
Location: 224400 - 225689 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160014_192 vegan > omnivore 1.36369 0.01389
opera_contig_160014_201 vegan > omnivore 1.00830 0.01389
opera_contig_160014_202 vegan > omnivore 1.47089 0.01389
opera_contig_160014_203 vegan > omnivore 1.59623 0.01389
opera_contig_160014_204 vegan > omnivore 1.45692 0.01389

🧭 Explore Read Mapping of CGC

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