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Cluster: SPMP19_bin.54_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160014 opera_contig_160014_179 191530 192543 - GH177
TF opera_contig_160014 opera_contig_160014_180 193219 194262 - LacI
TF opera_contig_160014 opera_contig_160014_181 194278 195864 - HTH_AraC | HTH_AraC
TC opera_contig_160014 opera_contig_160014_182 195864 197603 - 8.A.59.2.1
TC opera_contig_160014 opera_contig_160014_183 197738 199105 - 2.A.2.3.2
Gene ID: opera_contig_160014_179
Type: CAZyme
Location: 191530 - 192543 (-)
Gene ID: opera_contig_160014_180
Type: TF
Location: 193219 - 194262 (-)
Gene ID: opera_contig_160014_181
Type: TF
Location: 194278 - 195864 (-)
Gene ID: opera_contig_160014_182
Type: TC
Location: 195864 - 197603 (-)
Gene ID: opera_contig_160014_183
Type: TC
Location: 197738 - 199105 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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