dbCAN Logo

Cluster: SPMP19_bin.54_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160012 opera_contig_160012_68 88855 89616 + GH73
STP opera_contig_160012 opera_contig_160012_69 89755 91263 - Fer4 | Fer4
TC opera_contig_160012 opera_contig_160012_70 91663 92142 + 3.D.1.5.1
TC opera_contig_160012 opera_contig_160012_71 92139 94010 + 3.D.1.5.1
Gene ID: opera_contig_160012_68
Type: CAZyme
Location: 88855 - 89616 (+)
Gene ID: opera_contig_160012_69
Type: STP
Location: 89755 - 91263 (-)
Gene ID: opera_contig_160012_70
Type: TC
Location: 91663 - 92142 (+)
Gene ID: opera_contig_160012_71
Type: TC
Location: 92139 - 94010 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160012_70 vegan > omnivore 1.28796 0.01389
opera_contig_160012_71 vegan > omnivore 1.32741 0.01389

🧭 Explore Read Mapping of CGC

← Back to Cluster List