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Cluster: SPMP19_bin.54_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160012 opera_contig_160012_6 17064 18344 + GT4
pfam opera_contig_160012 opera_contig_160012_7 18407 19384 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme opera_contig_160012 opera_contig_160012_8 19386 20432 + GT4
pfam opera_contig_160012 opera_contig_160012_9 20432 21844 + O-ag_pol_Wzy
TC opera_contig_160012 opera_contig_160012_10 21933 23390 + 2.A.66.2.16
CAZyme opera_contig_160012 opera_contig_160012_11 23387 24316 + GT2
Gene ID: opera_contig_160012_6
Type: CAZyme
Location: 17064 - 18344 (+)
Gene ID: opera_contig_160012_7
Type: pfam
Location: 18407 - 19384 (+)
Gene ID: opera_contig_160012_8
Type: CAZyme
Location: 19386 - 20432 (+)
Gene ID: opera_contig_160012_9
Type: pfam
Location: 20432 - 21844 (+)
Gene ID: opera_contig_160012_10
Type: TC
Location: 21933 - 23390 (+)
Gene ID: opera_contig_160012_11
Type: CAZyme
Location: 23387 - 24316 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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