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Cluster: SPMP19_bin.54_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160011 opera_contig_160011_94 109542 111065 - GH32
NULL(UNKNOWN) opera_contig_160011 opera_contig_160011_95 111118 112803 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_160011 opera_contig_160011_96 112820 113716 - 3.A.1.1.29
TC opera_contig_160011 opera_contig_160011_97 113728 114666 - 3.A.1.1.10
TF opera_contig_160011 opera_contig_160011_98 114963 115991 + LacI
CAZyme opera_contig_160011 opera_contig_160011_99 116153 117988 + GH13_4
pfam opera_contig_160011 opera_contig_160011_100 118087 119244 - Flavodoxin_1 | Lactamase_B | Flavodoxin_5 | ODP
pfam opera_contig_160011 opera_contig_160011_101 119482 120837 + MatE | MatE | MurJ
TC opera_contig_160011 opera_contig_160011_102 121073 122281 + 2.A.23.4.1
pfam opera_contig_160011 opera_contig_160011_103 122619 123248 - YdjM
CAZyme opera_contig_160011 opera_contig_160011_104 123533 125041 - GH77
Gene ID: opera_contig_160011_94
Type: CAZyme
Location: 109542 - 111065 (-)
Gene ID: opera_contig_160011_95
Type:
Location: 111118 - 112803 (-)
Gene ID: opera_contig_160011_96
Type: TC
Location: 112820 - 113716 (-)
Gene ID: opera_contig_160011_97
Type: TC
Location: 113728 - 114666 (-)
Gene ID: opera_contig_160011_98
Type: TF
Location: 114963 - 115991 (+)
Gene ID: opera_contig_160011_99
Type: CAZyme
Location: 116153 - 117988 (+)
Gene ID: opera_contig_160011_100
Type: pfam
Location: 118087 - 119244 (-)
Gene ID: opera_contig_160011_101
Type: pfam
Location: 119482 - 120837 (+)
Gene ID: opera_contig_160011_102
Type: TC
Location: 121073 - 122281 (+)
Gene ID: opera_contig_160011_103
Type: pfam
Location: 122619 - 123248 (-)
Gene ID: opera_contig_160011_104
Type: CAZyme
Location: 123533 - 125041 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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