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Cluster: SPMP19_bin.54_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160011 opera_contig_160011_27 30989 32668 - GH13_31
TC opera_contig_160011 opera_contig_160011_28 32868 33698 - 4.A.6.1.19
TC opera_contig_160011 opera_contig_160011_29 33695 34510 - 4.A.6.1.19
TC opera_contig_160011 opera_contig_160011_30 34560 35591 - 4.A.6.1.1
Gene ID: opera_contig_160011_27
Type: CAZyme
Location: 30989 - 32668 (-)
Gene ID: opera_contig_160011_28
Type: TC
Location: 32868 - 33698 (-)
Gene ID: opera_contig_160011_29
Type: TC
Location: 33695 - 34510 (-)
Gene ID: opera_contig_160011_30
Type: TC
Location: 34560 - 35591 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160011_30 vegan > omnivore 1.10307 0.01389

🧭 Explore Read Mapping of CGC

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