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Cluster: SPMP19_bin.54_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160011 opera_contig_160011_9 8029 9798 + 3.A.2.3.2
TC opera_contig_160011 opera_contig_160011_10 9814 11196 + 3.A.2.3.2
TC opera_contig_160011 opera_contig_160011_11 11209 11832 + 3.A.2.3.2
sulfatase opera_contig_160011 opera_contig_160011_12 12491 13234 - S1_9
CAZyme opera_contig_160011 opera_contig_160011_13 13338 14648 - GH29
TC opera_contig_160011 opera_contig_160011_14 14679 15524 - 3.A.1.1.39
TC opera_contig_160011 opera_contig_160011_15 15545 16465 - 3.A.1.1.20
TC opera_contig_160011 opera_contig_160011_16 16556 17830 - 3.A.1.1.21
CAZyme opera_contig_160011 opera_contig_160011_17 17769 18803 - GH29
Gene ID: opera_contig_160011_9
Type: TC
Location: 8029 - 9798 (+)
Gene ID: opera_contig_160011_10
Type: TC
Location: 9814 - 11196 (+)
Gene ID: opera_contig_160011_11
Type: TC
Location: 11209 - 11832 (+)
Gene ID: opera_contig_160011_12
Type: sulfatase
Location: 12491 - 13234 (-)
Gene ID: opera_contig_160011_13
Type: CAZyme
Location: 13338 - 14648 (-)
Gene ID: opera_contig_160011_14
Type: TC
Location: 14679 - 15524 (-)
Gene ID: opera_contig_160011_15
Type: TC
Location: 15545 - 16465 (-)
Gene ID: opera_contig_160011_16
Type: TC
Location: 16556 - 17830 (-)
Gene ID: opera_contig_160011_17
Type: CAZyme
Location: 17769 - 18803 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160011_13 vegan > omnivore 1.89232 0.01389
opera_contig_160011_14 vegan > omnivore 1.49916 0.01389
opera_contig_160011_14 vegetarian > omnivore 1.44147 0.04743
opera_contig_160011_15 vegan > omnivore 1.33040 0.01389
opera_contig_160011_15 vegetarian > omnivore 1.74660 0.04743
opera_contig_160011_16 vegetarian > omnivore 1.11048 0.04743
opera_contig_160011_17 vegan > omnivore 1.30060 0.01389
opera_contig_160011_17 vegetarian > omnivore 1.23435 0.04743

🧭 Explore Read Mapping of CGC

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