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Cluster: SPMP19_bin.54_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160010 opera_contig_160010_281 334299 336557 - 9.B.142.1.2
CAZyme opera_contig_160010 opera_contig_160010_282 336576 337286 - GT2
NULL(UNKNOWN) opera_contig_160010 opera_contig_160010_283 337276 339273 - NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_160010 opera_contig_160010_284 339343 340062 - Amidase_3
CAZyme opera_contig_160010 opera_contig_160010_285 340148 341797 - GH18
Gene ID: opera_contig_160010_281
Type: TC
Location: 334299 - 336557 (-)
Gene ID: opera_contig_160010_282
Type: CAZyme
Location: 336576 - 337286 (-)
Gene ID: opera_contig_160010_283
Type:
Location: 337276 - 339273 (-)
Gene ID: opera_contig_160010_284
Type: pfam
Location: 339343 - 340062 (-)
Gene ID: opera_contig_160010_285
Type: CAZyme
Location: 340148 - 341797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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