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Cluster: SPMP19_bin.54_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_160010 opera_contig_160010_232 269689 270441 - GT2
TC opera_contig_160010 opera_contig_160010_233 270448 271131 - 9.B.18.1.3
STP opera_contig_160010 opera_contig_160010_234 271157 272359 - Aminotran_1_2
TC opera_contig_160010 opera_contig_160010_235 272410 274620 - 9.B.18.2.1
TC opera_contig_160010 opera_contig_160010_236 274726 276144 - 9.B.18.1.2
pfam opera_contig_160010 opera_contig_160010_237 276232 277026 - Bact_surface_Ig-like
TC opera_contig_160010 opera_contig_160010_238 277078 277812 - 8.A.3.2.3
pfam opera_contig_160010 opera_contig_160010_239 277825 278541 - CpsB_CapC
TC opera_contig_160010 opera_contig_160010_240 278578 279303 - 8.A.3.2.3
pfam opera_contig_160010 opera_contig_160010_241 279603 280481 + S-methyl_trans
TC opera_contig_160010 opera_contig_160010_242 280638 282290 - 8.A.7.1.1
TC opera_contig_160010 opera_contig_160010_243 282320 283360 - 3.A.1.11.1
TC opera_contig_160010 opera_contig_160010_244 283394 285247 - 3.A.1.11.7
TC opera_contig_160010 opera_contig_160010_245 285260 286078 - 3.A.1.11.1
TC opera_contig_160010 opera_contig_160010_246 286078 287124 - 3.A.1.11.8
TC opera_contig_160010 opera_contig_160010_247 287114 287908 - 3.A.1.11.1
TC opera_contig_160010 opera_contig_160010_248 287905 288759 - 3.A.1.11.1
TC opera_contig_160010 opera_contig_160010_249 288752 290014 - 3.A.1.11.1
peptidase opera_contig_160010 opera_contig_160010_250 290271 291581 - M20.UND
pfam opera_contig_160010 opera_contig_160010_251 291623 292450 - S6PP | Hydrolase_3
CAZyme opera_contig_160010 opera_contig_160010_252 299011 301284 - CBM48 | GH13_9
Gene ID: opera_contig_160010_232
Type: CAZyme
Location: 269689 - 270441 (-)
Gene ID: opera_contig_160010_233
Type: TC
Location: 270448 - 271131 (-)
Gene ID: opera_contig_160010_234
Type: STP
Location: 271157 - 272359 (-)
Gene ID: opera_contig_160010_235
Type: TC
Location: 272410 - 274620 (-)
Gene ID: opera_contig_160010_236
Type: TC
Location: 274726 - 276144 (-)
Gene ID: opera_contig_160010_237
Type: pfam
Location: 276232 - 277026 (-)
Gene ID: opera_contig_160010_238
Type: TC
Location: 277078 - 277812 (-)
Gene ID: opera_contig_160010_239
Type: pfam
Location: 277825 - 278541 (-)
Gene ID: opera_contig_160010_240
Type: TC
Location: 278578 - 279303 (-)
Gene ID: opera_contig_160010_241
Type: pfam
Location: 279603 - 280481 (+)
Gene ID: opera_contig_160010_242
Type: TC
Location: 280638 - 282290 (-)
Gene ID: opera_contig_160010_243
Type: TC
Location: 282320 - 283360 (-)
Gene ID: opera_contig_160010_244
Type: TC
Location: 283394 - 285247 (-)
Gene ID: opera_contig_160010_245
Type: TC
Location: 285260 - 286078 (-)
Gene ID: opera_contig_160010_246
Type: TC
Location: 286078 - 287124 (-)
Gene ID: opera_contig_160010_247
Type: TC
Location: 287114 - 287908 (-)
Gene ID: opera_contig_160010_248
Type: TC
Location: 287905 - 288759 (-)
Gene ID: opera_contig_160010_249
Type: TC
Location: 288752 - 290014 (-)
Gene ID: opera_contig_160010_250
Type: peptidase
Location: 290271 - 291581 (-)
Gene ID: opera_contig_160010_251
Type: pfam
Location: 291623 - 292450 (-)
Gene ID: opera_contig_160010_252
Type: CAZyme
Location: 299011 - 301284 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160010_244 vegan > omnivore 1.11356 0.01389
opera_contig_160010_245 vegan > omnivore 1.04960 0.01389

🧭 Explore Read Mapping of CGC

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