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Cluster: SPMP19_bin.54_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_160009 opera_contig_160009_82 89353 90237 + 3.A.1.4.10
TC opera_contig_160009 opera_contig_160009_83 90248 91321 + 3.A.1.4.8
TC opera_contig_160009 opera_contig_160009_84 91324 92082 + 3.A.1.4.10
TC opera_contig_160009 opera_contig_160009_85 92097 92807 + 3.A.1.4.10
TC opera_contig_160009 opera_contig_160009_86 92818 93438 + 2.A.115.2.14
CAZyme opera_contig_160009 opera_contig_160009_87 93541 94305 + CE4
Gene ID: opera_contig_160009_82
Type: TC
Location: 89353 - 90237 (+)
Gene ID: opera_contig_160009_83
Type: TC
Location: 90248 - 91321 (+)
Gene ID: opera_contig_160009_84
Type: TC
Location: 91324 - 92082 (+)
Gene ID: opera_contig_160009_85
Type: TC
Location: 92097 - 92807 (+)
Gene ID: opera_contig_160009_86
Type: TC
Location: 92818 - 93438 (+)
Gene ID: opera_contig_160009_87
Type: CAZyme
Location: 93541 - 94305 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_160009_83 vegan > omnivore 1.00843 0.01389

🧭 Explore Read Mapping of CGC

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