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Cluster: SPMP19_bin.13_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_162221 opera_contig_162221_385 434887 436053 - CE9
STP opera_contig_162221 opera_contig_162221_386 436239 437405 - SIS
TF opera_contig_162221 opera_contig_162221_387 437472 438203 - GntR
TC opera_contig_162221 opera_contig_162221_388 438287 438715 - 4.A.6.1.2
NULL(UNKNOWN) opera_contig_162221 opera_contig_162221_389 438899 439561 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_162221 opera_contig_162221_390 439799 440641 - 4.A.6.1.18
TC opera_contig_162221 opera_contig_162221_391 440631 441533 - 4.A.6.1.18
TC opera_contig_162221 opera_contig_162221_392 441635 442099 - 4.A.6.1.18
CAZyme opera_contig_162221 opera_contig_162221_393 442101 443903 - GH35
Gene ID: opera_contig_162221_385
Type: CAZyme
Location: 434887 - 436053 (-)
Gene ID: opera_contig_162221_386
Type: STP
Location: 436239 - 437405 (-)
Gene ID: opera_contig_162221_387
Type: TF
Location: 437472 - 438203 (-)
Gene ID: opera_contig_162221_388
Type: TC
Location: 438287 - 438715 (-)
Gene ID: opera_contig_162221_389
Type:
Location: 438899 - 439561 (-)
Gene ID: opera_contig_162221_390
Type: TC
Location: 439799 - 440641 (-)
Gene ID: opera_contig_162221_391
Type: TC
Location: 440631 - 441533 (-)
Gene ID: opera_contig_162221_392
Type: TC
Location: 441635 - 442099 (-)
Gene ID: opera_contig_162221_393
Type: CAZyme
Location: 442101 - 443903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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