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Cluster: SPMP19_bin.13_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_162221 opera_contig_162221_146 169403 169696 - 4.A.3.2.8
TF opera_contig_162221 opera_contig_162221_147 169693 170415 - HTH_6
pfam opera_contig_162221 opera_contig_162221_148 170434 171066 - RDD
TC opera_contig_162221 opera_contig_162221_149 171167 172483 - 4.A.3.2.8
CAZyme opera_contig_162221 opera_contig_162221_150 172508 173914 - GH4
Gene ID: opera_contig_162221_146
Type: TC
Location: 169403 - 169696 (-)
Gene ID: opera_contig_162221_147
Type: TF
Location: 169693 - 170415 (-)
Gene ID: opera_contig_162221_148
Type: pfam
Location: 170434 - 171066 (-)
Gene ID: opera_contig_162221_149
Type: TC
Location: 171167 - 172483 (-)
Gene ID: opera_contig_162221_150
Type: CAZyme
Location: 172508 - 173914 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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