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Cluster: SPMP19_bin.13_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_162224 opera_contig_162224_4 3141 4481 + 3.A.1.1.45
TC opera_contig_162224 opera_contig_162224_5 4599 5441 + 3.A.1.1.45
TC opera_contig_162224 opera_contig_162224_6 5442 6278 + 3.A.1.1.45
TF opera_contig_162224 opera_contig_162224_7 6285 7463 + LacI
CAZyme opera_contig_162224 opera_contig_162224_8 7460 9052 + GH77
TC opera_contig_162224 opera_contig_162224_9 9066 10256 + 3.A.1.1.22
Gene ID: opera_contig_162224_4
Type: TC
Location: 3141 - 4481 (+)
Gene ID: opera_contig_162224_5
Type: TC
Location: 4599 - 5441 (+)
Gene ID: opera_contig_162224_6
Type: TC
Location: 5442 - 6278 (+)
Gene ID: opera_contig_162224_7
Type: TF
Location: 6285 - 7463 (+)
Gene ID: opera_contig_162224_8
Type: CAZyme
Location: 7460 - 9052 (+)
Gene ID: opera_contig_162224_9
Type: TC
Location: 9066 - 10256 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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