dbCAN HGM

Cluster: SPMP19_bin.13_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	opera_contig_162222	opera_contig_162222_55	61577	63520	+	GH13_4
TF	opera_contig_162222	opera_contig_162222_56	63615	64469	-	HTH_AraC \| HTH_AraC
TC	opera_contig_162222	opera_contig_162222_57	64885	65994	+	3.A.1.1.26
TC	opera_contig_162222	opera_contig_162222_58	66016	67299	+	3.A.1.1.28
TC	opera_contig_162222	opera_contig_162222_59	67312	68181	+	3.A.1.1.28
TC	opera_contig_162222	opera_contig_162222_60	68181	69026	+	3.A.1.1.28
CAZyme	opera_contig_162222	opera_contig_162222_61	69200	70903	-	GH13_30
CAZyme	opera_contig_162222	opera_contig_162222_62	70940	73204	-	GT35
CAZyme	opera_contig_162222	opera_contig_162222_63	73206	74759	-	GH77
TF	opera_contig_162222	opera_contig_162222_64	74778	75842	-	LacI
CAZyme	opera_contig_162222	opera_contig_162222_65	76392	78587	+	GH36

Gene ID: opera_contig_162222_55
Type: CAZyme
Location: 61577 - 63520 (+)

Gene ID: opera_contig_162222_56
Type: TF
Location: 63615 - 64469 (-)

Gene ID: opera_contig_162222_57
Type: TC
Location: 64885 - 65994 (+)

Gene ID: opera_contig_162222_58
Type: TC
Location: 66016 - 67299 (+)

Gene ID: opera_contig_162222_59
Type: TC
Location: 67312 - 68181 (+)

Gene ID: opera_contig_162222_60
Type: TC
Location: 68181 - 69026 (+)

Gene ID: opera_contig_162222_61
Type: CAZyme
Location: 69200 - 70903 (-)

Gene ID: opera_contig_162222_62
Type: CAZyme
Location: 70940 - 73204 (-)

Gene ID: opera_contig_162222_63
Type: CAZyme
Location: 73206 - 74759 (-)

Gene ID: opera_contig_162222_64
Type: TF
Location: 74778 - 75842 (-)

Gene ID: opera_contig_162222_65
Type: CAZyme
Location: 76392 - 78587 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.