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Cluster: SPMP19_bin.13_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_162222 opera_contig_162222_25 29374 30405 + 9.B.146.1.6
pfam opera_contig_162222 opera_contig_162222_26 30415 31821 + Mur_ligase_C | Mur_ligase_M
TC opera_contig_162222 opera_contig_162222_27 31855 33540 + 2.A.103.1.1
CAZyme opera_contig_162222 opera_contig_162222_28 33530 34654 + GT28
Gene ID: opera_contig_162222_25
Type: TC
Location: 29374 - 30405 (+)
Gene ID: opera_contig_162222_26
Type: pfam
Location: 30415 - 31821 (+)
Gene ID: opera_contig_162222_27
Type: TC
Location: 31855 - 33540 (+)
Gene ID: opera_contig_162222_28
Type: CAZyme
Location: 33530 - 34654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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