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Cluster: SPMP17_bin.41_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_2 opera_contig_2_42 56899 59349 - 4.A.1.1.8
NULL(UNKNOWN) opera_contig_2 opera_contig_2_43 59371 59490 + NULL(UNKNOWN)
[View Structural Homologs]
TF opera_contig_2 opera_contig_2_44 59574 60293 + GntR
TC opera_contig_2 opera_contig_2_45 60600 61916 + 3.A.1.1.45
TC opera_contig_2 opera_contig_2_46 62004 62858 + 3.A.1.1.45
TC opera_contig_2 opera_contig_2_47 62858 63697 + 3.A.1.1.45
TC opera_contig_2 opera_contig_2_48 63766 64965 + 3.A.1.1.22
CAZyme opera_contig_2 opera_contig_2_49 65422 67689 - GT35
CAZyme opera_contig_2 opera_contig_2_50 67818 69323 - GH77
Gene ID: opera_contig_2_42
Type: TC
Location: 56899 - 59349 (-)
Gene ID: opera_contig_2_43
Type:
Location: 59371 - 59490 (+)
Gene ID: opera_contig_2_44
Type: TF
Location: 59574 - 60293 (+)
Gene ID: opera_contig_2_45
Type: TC
Location: 60600 - 61916 (+)
Gene ID: opera_contig_2_46
Type: TC
Location: 62004 - 62858 (+)
Gene ID: opera_contig_2_47
Type: TC
Location: 62858 - 63697 (+)
Gene ID: opera_contig_2_48
Type: TC
Location: 63766 - 64965 (+)
Gene ID: opera_contig_2_49
Type: CAZyme
Location: 65422 - 67689 (-)
Gene ID: opera_contig_2_50
Type: CAZyme
Location: 67818 - 69323 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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