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Cluster: SPMP17_bin.41_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_1 opera_contig_1_398 444735 445661 - CE7
TC opera_contig_1 opera_contig_1_399 445793 446620 - 3.A.1.5.27
TC opera_contig_1 opera_contig_1_400 446621 448636 - 3.A.1.5.25
TC opera_contig_1 opera_contig_1_401 448640 449596 - 3.A.1.5.38
TC opera_contig_1 opera_contig_1_402 449752 451365 - 3.A.1.5.27
pfam opera_contig_1 opera_contig_1_403 451731 453671 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC opera_contig_1 opera_contig_1_404 453678 455360 - 2.A.66.4.4
Gene ID: opera_contig_1_398
Type: CAZyme
Location: 444735 - 445661 (-)
Gene ID: opera_contig_1_399
Type: TC
Location: 445793 - 446620 (-)
Gene ID: opera_contig_1_400
Type: TC
Location: 446621 - 448636 (-)
Gene ID: opera_contig_1_401
Type: TC
Location: 448640 - 449596 (-)
Gene ID: opera_contig_1_402
Type: TC
Location: 449752 - 451365 (-)
Gene ID: opera_contig_1_403
Type: pfam
Location: 451731 - 453671 (-)
Gene ID: opera_contig_1_404
Type: TC
Location: 453678 - 455360 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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