Cluster: SPMP16_bin.51_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP16_bin.51
- CGC Family ID: CGCFAM_06525
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_210435 | opera_contig_210435_671 | 769792 | 770376 | + | 3.A.6.2.1 |
| NULL(UNKNOWN) | opera_contig_210435 | opera_contig_210435_672 | 770387 | 770608 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_210435 | opera_contig_210435_673 | 770901 | 771698 | + | 3.A.6.2.1 |
| TC | opera_contig_210435 | opera_contig_210435_674 | 771852 | 772121 | + | 3.A.6.2.1 |
| pfam | opera_contig_210435 | opera_contig_210435_675 | 772156 | 772725 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 |
| pfam | opera_contig_210435 | opera_contig_210435_676 | 773016 | 773810 | - | SpoU_methylase | SpoU_sub_bind |
| CAZyme | opera_contig_210435 | opera_contig_210435_677 | 773954 | 775615 | + | GH23 |
Gene ID: opera_contig_210435_671
Type: TC
Location: 769792 - 770376 (+)
Type: TC
Location: 769792 - 770376 (+)
Gene ID: opera_contig_210435_672
Type:
Location: 770387 - 770608 (-)
Type:
Location: 770387 - 770608 (-)
Gene ID: opera_contig_210435_673
Type: TC
Location: 770901 - 771698 (+)
Type: TC
Location: 770901 - 771698 (+)
Gene ID: opera_contig_210435_674
Type: TC
Location: 771852 - 772121 (+)
Type: TC
Location: 771852 - 772121 (+)
Gene ID: opera_contig_210435_675
Type: pfam
Location: 772156 - 772725 (-)
Type: pfam
Location: 772156 - 772725 (-)
Gene ID: opera_contig_210435_676
Type: pfam
Location: 773016 - 773810 (-)
Type: pfam
Location: 773016 - 773810 (-)
Gene ID: opera_contig_210435_677
Type: CAZyme
Location: 773954 - 775615 (+)
Type: CAZyme
Location: 773954 - 775615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.