Cluster: SPMP16_bin.51_CGC6
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP16_bin.51
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_210435 | opera_contig_210435_495 | 576760 | 578628 | - | 2.A.53.3.4 |
| TC | opera_contig_210435 | opera_contig_210435_496 | 578631 | 580403 | - | 2.A.53.3.4 |
| NULL(UNKNOWN) | opera_contig_210435 | opera_contig_210435_497 | 580405 | 580905 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | opera_contig_210435 | opera_contig_210435_498 | 580883 | 581371 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_210435 | opera_contig_210435_499 | 581867 | 583006 | + | GH23 |
| pfam | opera_contig_210435 | opera_contig_210435_500 | 583250 | 583885 | + | OmpH |
| TC | opera_contig_210435 | opera_contig_210435_501 | 583964 | 584401 | - | 9.B.27.3.3 |
| NULL(UNKNOWN) | opera_contig_210435 | opera_contig_210435_502 | 584445 | 584744 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_210435 | opera_contig_210435_503 | 584763 | 585785 | - | 3.D.4.3.2 |
| TC | opera_contig_210435 | opera_contig_210435_504 | 585788 | 587104 | - | 3.D.4.3.2 |
| pfam | opera_contig_210435 | opera_contig_210435_505 | 587436 | 588812 | + | Amino_oxidase | NAD_binding_8 |
| pfam | opera_contig_210435 | opera_contig_210435_506 | 588919 | 589302 | + | Ribonuc_L-PSP |
| TC | opera_contig_210435 | opera_contig_210435_507 | 589437 | 590768 | + | 2.A.1.1.114 |
Gene ID: opera_contig_210435_495
Type: TC
Location: 576760 - 578628 (-)
Type: TC
Location: 576760 - 578628 (-)
Gene ID: opera_contig_210435_496
Type: TC
Location: 578631 - 580403 (-)
Type: TC
Location: 578631 - 580403 (-)
Gene ID: opera_contig_210435_497
Type:
Location: 580405 - 580905 (-)
Type:
Location: 580405 - 580905 (-)
Gene ID: opera_contig_210435_498
Type:
Location: 580883 - 581371 (-)
Type:
Location: 580883 - 581371 (-)
Gene ID: opera_contig_210435_499
Type: CAZyme
Location: 581867 - 583006 (+)
Type: CAZyme
Location: 581867 - 583006 (+)
Gene ID: opera_contig_210435_500
Type: pfam
Location: 583250 - 583885 (+)
Type: pfam
Location: 583250 - 583885 (+)
Gene ID: opera_contig_210435_501
Type: TC
Location: 583964 - 584401 (-)
Type: TC
Location: 583964 - 584401 (-)
Gene ID: opera_contig_210435_502
Type:
Location: 584445 - 584744 (-)
Type:
Location: 584445 - 584744 (-)
Gene ID: opera_contig_210435_503
Type: TC
Location: 584763 - 585785 (-)
Type: TC
Location: 584763 - 585785 (-)
Gene ID: opera_contig_210435_504
Type: TC
Location: 585788 - 587104 (-)
Type: TC
Location: 585788 - 587104 (-)
Gene ID: opera_contig_210435_505
Type: pfam
Location: 587436 - 588812 (+)
Type: pfam
Location: 587436 - 588812 (+)
Gene ID: opera_contig_210435_506
Type: pfam
Location: 588919 - 589302 (+)
Type: pfam
Location: 588919 - 589302 (+)
Gene ID: opera_contig_210435_507
Type: TC
Location: 589437 - 590768 (+)
Type: TC
Location: 589437 - 590768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.