Cluster: SPMP16_bin.51_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP16_bin.51
- CGC Family ID: CGCFAM_03570
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_210435 | opera_contig_210435_314 | 376908 | 377864 | + | GT2 |
| pfam | opera_contig_210435 | opera_contig_210435_315 | 377861 | 378334 | + | GtrA_DPMS_TM |
| CAZyme | opera_contig_210435 | opera_contig_210435_316 | 378331 | 379293 | + | GT2 |
| NULL(UNKNOWN) | opera_contig_210435 | opera_contig_210435_317 | 379504 | 380232 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_210435 | opera_contig_210435_318 | 380254 | 381894 | + | 2.A.14.1.3 |
| TC | opera_contig_210435 | opera_contig_210435_319 | 381998 | 383641 | - | 1.B.52.2.1 |
Gene ID: opera_contig_210435_314
Type: CAZyme
Location: 376908 - 377864 (+)
Type: CAZyme
Location: 376908 - 377864 (+)
Gene ID: opera_contig_210435_315
Type: pfam
Location: 377861 - 378334 (+)
Type: pfam
Location: 377861 - 378334 (+)
Gene ID: opera_contig_210435_316
Type: CAZyme
Location: 378331 - 379293 (+)
Type: CAZyme
Location: 378331 - 379293 (+)
Gene ID: opera_contig_210435_317
Type:
Location: 379504 - 380232 (-)
Type:
Location: 379504 - 380232 (-)
Gene ID: opera_contig_210435_318
Type: TC
Location: 380254 - 381894 (+)
Type: TC
Location: 380254 - 381894 (+)
Gene ID: opera_contig_210435_319
Type: TC
Location: 381998 - 383641 (-)
Type: TC
Location: 381998 - 383641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.