Cluster: SPMP16_bin.51_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP16_bin.51
- CGC Family ID: CGCFAM_10546
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_210448 | opera_contig_210448_3 | 3750 | 5465 | - | GT2 |
| NULL(UNKNOWN) | opera_contig_210448 | opera_contig_210448_4 | 6291 | 6932 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | opera_contig_210448 | opera_contig_210448_5 | 7474 | 9633 | - | ACT | HD |
| TC | opera_contig_210448 | opera_contig_210448_6 | 9801 | 11513 | - | 3.A.1.5.20 |
Gene ID: opera_contig_210448_3
Type: CAZyme
Location: 3750 - 5465 (-)
Type: CAZyme
Location: 3750 - 5465 (-)
Gene ID: opera_contig_210448_4
Type:
Location: 6291 - 6932 (-)
Type:
Location: 6291 - 6932 (-)
Gene ID: opera_contig_210448_5
Type: STP
Location: 7474 - 9633 (-)
Type: STP
Location: 7474 - 9633 (-)
Gene ID: opera_contig_210448_6
Type: TC
Location: 9801 - 11513 (-)
Type: TC
Location: 9801 - 11513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.