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Cluster: SPMP16_bin.51_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_210447 opera_contig_210447_31 43423 44553 + 3.A.1.4.1
TC opera_contig_210447 opera_contig_210447_32 44742 45650 + 3.A.1.4.8
TC opera_contig_210447 opera_contig_210447_33 45653 46873 + 3.A.1.4.8
TC opera_contig_210447 opera_contig_210447_34 46870 47655 + 3.A.1.4.1
TC opera_contig_210447 opera_contig_210447_35 47648 48352 + 3.A.1.4.10
pfam opera_contig_210447 opera_contig_210447_36 48368 48787 - PNPOx_N | Pyrid_ox_like
CAZyme opera_contig_210447 opera_contig_210447_37 48898 49983 - GT1
CAZyme opera_contig_210447 opera_contig_210447_38 50150 51172 + GT2
Gene ID: opera_contig_210447_31
Type: TC
Location: 43423 - 44553 (+)
Gene ID: opera_contig_210447_32
Type: TC
Location: 44742 - 45650 (+)
Gene ID: opera_contig_210447_33
Type: TC
Location: 45653 - 46873 (+)
Gene ID: opera_contig_210447_34
Type: TC
Location: 46870 - 47655 (+)
Gene ID: opera_contig_210447_35
Type: TC
Location: 47648 - 48352 (+)
Gene ID: opera_contig_210447_36
Type: pfam
Location: 48368 - 48787 (-)
Gene ID: opera_contig_210447_37
Type: CAZyme
Location: 48898 - 49983 (-)
Gene ID: opera_contig_210447_38
Type: CAZyme
Location: 50150 - 51172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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