Cluster: SPMP16_bin.51_CGC20
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP16_bin.51
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_210441 | opera_contig_210441_102 | 115692 | 117074 | - | 9.B.160.1.10 |
| NULL(UNKNOWN) | opera_contig_210441 | opera_contig_210441_103 | 117077 | 117319 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_210441 | opera_contig_210441_104 | 117494 | 118618 | + | DBI_PRT |
| TC | opera_contig_210441 | opera_contig_210441_105 | 118619 | 119584 | + | 3.A.1.5.20 |
| pfam | opera_contig_210441 | opera_contig_210441_106 | 119652 | 120620 | + | Radical_SAM |
| pfam | opera_contig_210441 | opera_contig_210441_107 | 120645 | 122561 | - | Orn_Arg_deC_N | Arg_decarb_HB | Arg_decarbox_C |
| TC | opera_contig_210441 | opera_contig_210441_108 | 123011 | 124114 | + | 2.A.6.2.35 |
| pfam | opera_contig_210441 | opera_contig_210441_109 | 124152 | 124781 | - | UPF0029 | DUF1949 |
| pfam | opera_contig_210441 | opera_contig_210441_110 | 124781 | 125377 | - | Cupin_5 |
| CAZyme | opera_contig_210441 | opera_contig_210441_111 | 125630 | 126778 | + | GT4 |
| pfam | opera_contig_210441 | opera_contig_210441_112 | 126775 | 128061 | + | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | opera_contig_210441 | opera_contig_210441_113 | 128065 | 128946 | + | GT2 |
| NULL(UNKNOWN) | opera_contig_210441 | opera_contig_210441_114 | 129742 | 130416 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_210441 | opera_contig_210441_115 | 130413 | 131519 | + | GT4 |
| pfam | opera_contig_210441 | opera_contig_210441_116 | 131697 | 132200 | + | Rubrerythrin | RUBY_RBDX |
| TC | opera_contig_210441 | opera_contig_210441_117 | 132692 | 134020 | + | 9.B.174.1.1 |
Gene ID: opera_contig_210441_102
Type: TC
Location: 115692 - 117074 (-)
Type: TC
Location: 115692 - 117074 (-)
Gene ID: opera_contig_210441_103
Type:
Location: 117077 - 117319 (-)
Type:
Location: 117077 - 117319 (-)
Gene ID: opera_contig_210441_104
Type: pfam
Location: 117494 - 118618 (+)
Type: pfam
Location: 117494 - 118618 (+)
Gene ID: opera_contig_210441_105
Type: TC
Location: 118619 - 119584 (+)
Type: TC
Location: 118619 - 119584 (+)
Gene ID: opera_contig_210441_106
Type: pfam
Location: 119652 - 120620 (+)
Type: pfam
Location: 119652 - 120620 (+)
Gene ID: opera_contig_210441_107
Type: pfam
Location: 120645 - 122561 (-)
Type: pfam
Location: 120645 - 122561 (-)
Gene ID: opera_contig_210441_108
Type: TC
Location: 123011 - 124114 (+)
Type: TC
Location: 123011 - 124114 (+)
Gene ID: opera_contig_210441_109
Type: pfam
Location: 124152 - 124781 (-)
Type: pfam
Location: 124152 - 124781 (-)
Gene ID: opera_contig_210441_110
Type: pfam
Location: 124781 - 125377 (-)
Type: pfam
Location: 124781 - 125377 (-)
Gene ID: opera_contig_210441_111
Type: CAZyme
Location: 125630 - 126778 (+)
Type: CAZyme
Location: 125630 - 126778 (+)
Gene ID: opera_contig_210441_112
Type: pfam
Location: 126775 - 128061 (+)
Type: pfam
Location: 126775 - 128061 (+)
Gene ID: opera_contig_210441_113
Type: CAZyme
Location: 128065 - 128946 (+)
Type: CAZyme
Location: 128065 - 128946 (+)
Gene ID: opera_contig_210441_114
Type:
Location: 129742 - 130416 (+)
Type:
Location: 129742 - 130416 (+)
Gene ID: opera_contig_210441_115
Type: CAZyme
Location: 130413 - 131519 (+)
Type: CAZyme
Location: 130413 - 131519 (+)
Gene ID: opera_contig_210441_116
Type: pfam
Location: 131697 - 132200 (+)
Type: pfam
Location: 131697 - 132200 (+)
Gene ID: opera_contig_210441_117
Type: TC
Location: 132692 - 134020 (+)
Type: TC
Location: 132692 - 134020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.