dbCAN HGM

Cluster: SPMP16_bin.51_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	opera_contig_210435	opera_contig_210435_248	298753	299706	+	3.D.6.1.2
TC	opera_contig_210435	opera_contig_210435_249	299709	300284	+	3.D.6.1.3
TC	opera_contig_210435	opera_contig_210435_250	300322	300996	+	3.D.6.1.2
TC	opera_contig_210435	opera_contig_210435_251	301050	301625	+	3.D.6.1.2
TC	opera_contig_210435	opera_contig_210435_252	301945	302853	+	3.D.6.1.3
pfam	opera_contig_210435	opera_contig_210435_253	302866	303921	+	ApbE
pfam	opera_contig_210435	opera_contig_210435_254	304124	305110	+	Glyco_transf_10
CAZyme	opera_contig_210435	opera_contig_210435_255	305163	306104	+	GT2
TC	opera_contig_210435	opera_contig_210435_256	306114	307463	-	9.B.18.1.3
CAZyme	opera_contig_210435	opera_contig_210435_257	307474	308610	-	GT4
pfam	opera_contig_210435	opera_contig_210435_258	308861	309883	+	3Beta_HSD \| Epimerase \| Polysacc_synt_2 \| NAD_binding_4 \| GDP_Man_Dehyd
TC	opera_contig_210435	opera_contig_210435_259	310302	310685	+	1.E.14.1.16
TC	opera_contig_210435	opera_contig_210435_260	310673	311371	+	2.A.122.1.1

Gene ID: opera_contig_210435_248
Type: TC
Location: 298753 - 299706 (+)

Gene ID: opera_contig_210435_249
Type: TC
Location: 299709 - 300284 (+)

Gene ID: opera_contig_210435_250
Type: TC
Location: 300322 - 300996 (+)

Gene ID: opera_contig_210435_251
Type: TC
Location: 301050 - 301625 (+)

Gene ID: opera_contig_210435_252
Type: TC
Location: 301945 - 302853 (+)

Gene ID: opera_contig_210435_253
Type: pfam
Location: 302866 - 303921 (+)

Gene ID: opera_contig_210435_254
Type: pfam
Location: 304124 - 305110 (+)

Gene ID: opera_contig_210435_255
Type: CAZyme
Location: 305163 - 306104 (+)

Gene ID: opera_contig_210435_256
Type: TC
Location: 306114 - 307463 (-)

Gene ID: opera_contig_210435_257
Type: CAZyme
Location: 307474 - 308610 (-)

Gene ID: opera_contig_210435_258
Type: pfam
Location: 308861 - 309883 (+)

Gene ID: opera_contig_210435_259
Type: TC
Location: 310302 - 310685 (+)

Gene ID: opera_contig_210435_260
Type: TC
Location: 310673 - 311371 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.