Cluster: SPMP16_bin.51_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP16_bin.51
- CGC Family ID: CGCFAM_09851
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_210438 | opera_contig_210438_114 | 111727 | 112971 | + | 8.A.1.1.1 |
| TC | opera_contig_210438 | opera_contig_210438_115 | 112968 | 114476 | + | 2.A.1.3.2 |
| STP | opera_contig_210438 | opera_contig_210438_116 | 114444 | 115118 | - | TetR_N |
| pfam | opera_contig_210438 | opera_contig_210438_117 | 115239 | 116720 | - | DUF87 | HerA_C |
| CAZyme | opera_contig_210438 | opera_contig_210438_118 | 116968 | 118182 | - | GH102 |
Gene ID: opera_contig_210438_114
Type: TC
Location: 111727 - 112971 (+)
Type: TC
Location: 111727 - 112971 (+)
Gene ID: opera_contig_210438_115
Type: TC
Location: 112968 - 114476 (+)
Type: TC
Location: 112968 - 114476 (+)
Gene ID: opera_contig_210438_116
Type: STP
Location: 114444 - 115118 (-)
Type: STP
Location: 114444 - 115118 (-)
Gene ID: opera_contig_210438_117
Type: pfam
Location: 115239 - 116720 (-)
Type: pfam
Location: 115239 - 116720 (-)
Gene ID: opera_contig_210438_118
Type: CAZyme
Location: 116968 - 118182 (-)
Type: CAZyme
Location: 116968 - 118182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.