Cluster: SPMP16_bin.51_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP16_bin.51
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_210437 | opera_contig_210437_149 | 173073 | 175331 | + | GT66 |
| pfam | opera_contig_210437 | opera_contig_210437_150 | 175408 | 175692 | - | TonB_C |
| TC | opera_contig_210437 | opera_contig_210437_151 | 176485 | 177300 | - | 3.A.1.15.14 |
| TC | opera_contig_210437 | opera_contig_210437_152 | 177478 | 178296 | - | 3.A.1.15.8 |
Gene ID: opera_contig_210437_149
Type: CAZyme
Location: 173073 - 175331 (+)
Type: CAZyme
Location: 173073 - 175331 (+)
Gene ID: opera_contig_210437_150
Type: pfam
Location: 175408 - 175692 (-)
Type: pfam
Location: 175408 - 175692 (-)
Gene ID: opera_contig_210437_151
Type: TC
Location: 176485 - 177300 (-)
Type: TC
Location: 176485 - 177300 (-)
Gene ID: opera_contig_210437_152
Type: TC
Location: 177478 - 178296 (-)
Type: TC
Location: 177478 - 178296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio fairfieldensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.