Cluster: SPMP12_bin.36_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP12_bin.36
- CGC Family ID: CGCFAM_08669
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_190202 | opera_contig_190202_288 | 299189 | 299893 | + | 2.A.66.1.26 |
| TC | opera_contig_190202 | opera_contig_190202_289 | 299845 | 300561 | + | 2.A.66.1.13 |
| TC | opera_contig_190202 | opera_contig_190202_290 | 300847 | 302397 | + | 2.A.14.1.2 |
| CAZyme | opera_contig_190202 | opera_contig_190202_291 | 302429 | 303856 | + | AA4 |
Gene ID: opera_contig_190202_288
Type: TC
Location: 299189 - 299893 (+)
Type: TC
Location: 299189 - 299893 (+)
Gene ID: opera_contig_190202_289
Type: TC
Location: 299845 - 300561 (+)
Type: TC
Location: 299845 - 300561 (+)
Gene ID: opera_contig_190202_290
Type: TC
Location: 300847 - 302397 (+)
Type: TC
Location: 300847 - 302397 (+)
Gene ID: opera_contig_190202_291
Type: CAZyme
Location: 302429 - 303856 (+)
Type: CAZyme
Location: 302429 - 303856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190202_290 | vegan > omnivore | 1.13775 | 0.01416 |
| opera_contig_190202_291 | vegan > omnivore | 1.18097 | 0.01416 |