Cluster: SPMP12_bin.36_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP12_bin.36
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_190201 | opera_contig_190201_617 | 642044 | 642895 | + | CE4 |
| TF | opera_contig_190201 | opera_contig_190201_618 | 643379 | 644188 | + | MerR |
| TC | opera_contig_190201 | opera_contig_190201_619 | 644312 | 645751 | + | 2.A.25.1.9 |
| pfam | opera_contig_190201 | opera_contig_190201_620 | 645751 | 646701 | + | S-methyl_trans |
| pfam | opera_contig_190201 | opera_contig_190201_621 | 646807 | 647076 | + | DUF1294 |
| TC | opera_contig_190201 | opera_contig_190201_622 | 647153 | 648226 | + | 9.B.34.1.3 |
| STP | opera_contig_190201 | opera_contig_190201_623 | 648228 | 650150 | + | EAL | GGDEF |
| pfam | opera_contig_190201 | opera_contig_190201_624 | 650308 | 651585 | + | DDE_Tnp_1 | DDE_Tnp_1_4 |
| TC | opera_contig_190201 | opera_contig_190201_625 | 651898 | 653130 | + | 2.A.23.1.5 |
Gene ID: opera_contig_190201_617
Type: CAZyme
Location: 642044 - 642895 (+)
Type: CAZyme
Location: 642044 - 642895 (+)
Gene ID: opera_contig_190201_618
Type: TF
Location: 643379 - 644188 (+)
Type: TF
Location: 643379 - 644188 (+)
Gene ID: opera_contig_190201_619
Type: TC
Location: 644312 - 645751 (+)
Type: TC
Location: 644312 - 645751 (+)
Gene ID: opera_contig_190201_620
Type: pfam
Location: 645751 - 646701 (+)
Type: pfam
Location: 645751 - 646701 (+)
Gene ID: opera_contig_190201_621
Type: pfam
Location: 646807 - 647076 (+)
Type: pfam
Location: 646807 - 647076 (+)
Gene ID: opera_contig_190201_622
Type: TC
Location: 647153 - 648226 (+)
Type: TC
Location: 647153 - 648226 (+)
Gene ID: opera_contig_190201_623
Type: STP
Location: 648228 - 650150 (+)
Type: STP
Location: 648228 - 650150 (+)
Gene ID: opera_contig_190201_624
Type: pfam
Location: 650308 - 651585 (+)
Type: pfam
Location: 650308 - 651585 (+)
Gene ID: opera_contig_190201_625
Type: TC
Location: 651898 - 653130 (+)
Type: TC
Location: 651898 - 653130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190201_618 | vegan > omnivore | 2.30379 | 0.01416 |
| opera_contig_190201_619 | vegan > omnivore | 1.41632 | 0.01416 |