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Cluster: SPMP12_bin.36_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_190201 opera_contig_190201_597 620941 622305 - 2.A.40.7.6
pfam opera_contig_190201 opera_contig_190201_598 622796 623092 + Thiamine_BP
TC opera_contig_190201 opera_contig_190201_599 623061 623825 + 3.A.1.17.8
TC opera_contig_190201 opera_contig_190201_600 623835 624839 + 3.A.1.17.8
TC opera_contig_190201 opera_contig_190201_601 624843 625577 + 3.A.1.17.13
pfam opera_contig_190201 opera_contig_190201_602 625703 628933 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
NULL(UNKNOWN) opera_contig_190201 opera_contig_190201_603 629078 629239 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_190201 opera_contig_190201_604 629607 631175 + 4.A.1.1.8
CAZyme opera_contig_190201 opera_contig_190201_605 631215 632549 + GH4
TC opera_contig_190201 opera_contig_190201_606 632589 633074 + 4.A.1.1.1
Gene ID: opera_contig_190201_597
Type: TC
Location: 620941 - 622305 (-)
Gene ID: opera_contig_190201_598
Type: pfam
Location: 622796 - 623092 (+)
Gene ID: opera_contig_190201_599
Type: TC
Location: 623061 - 623825 (+)
Gene ID: opera_contig_190201_600
Type: TC
Location: 623835 - 624839 (+)
Gene ID: opera_contig_190201_601
Type: TC
Location: 624843 - 625577 (+)
Gene ID: opera_contig_190201_602
Type: pfam
Location: 625703 - 628933 (+)
Gene ID: opera_contig_190201_603
Type:
Location: 629078 - 629239 (+)
Gene ID: opera_contig_190201_604
Type: TC
Location: 629607 - 631175 (+)
Gene ID: opera_contig_190201_605
Type: CAZyme
Location: 631215 - 632549 (+)
Gene ID: opera_contig_190201_606
Type: TC
Location: 632589 - 633074 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_190201_604 vegan > omnivore 1.78983 0.01416

🧭 Explore Read Mapping of CGC

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