Cluster: SPMP12_bin.36_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP12_bin.36
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_190201 | opera_contig_190201_597 | 620941 | 622305 | - | 2.A.40.7.6 |
| pfam | opera_contig_190201 | opera_contig_190201_598 | 622796 | 623092 | + | Thiamine_BP |
| TC | opera_contig_190201 | opera_contig_190201_599 | 623061 | 623825 | + | 3.A.1.17.8 |
| TC | opera_contig_190201 | opera_contig_190201_600 | 623835 | 624839 | + | 3.A.1.17.8 |
| TC | opera_contig_190201 | opera_contig_190201_601 | 624843 | 625577 | + | 3.A.1.17.13 |
| pfam | opera_contig_190201 | opera_contig_190201_602 | 625703 | 628933 | + | MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C |
| NULL(UNKNOWN) | opera_contig_190201 | opera_contig_190201_603 | 629078 | 629239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_190201 | opera_contig_190201_604 | 629607 | 631175 | + | 4.A.1.1.8 |
| CAZyme | opera_contig_190201 | opera_contig_190201_605 | 631215 | 632549 | + | GH4 |
| TC | opera_contig_190201 | opera_contig_190201_606 | 632589 | 633074 | + | 4.A.1.1.1 |
Gene ID: opera_contig_190201_597
Type: TC
Location: 620941 - 622305 (-)
Type: TC
Location: 620941 - 622305 (-)
Gene ID: opera_contig_190201_598
Type: pfam
Location: 622796 - 623092 (+)
Type: pfam
Location: 622796 - 623092 (+)
Gene ID: opera_contig_190201_599
Type: TC
Location: 623061 - 623825 (+)
Type: TC
Location: 623061 - 623825 (+)
Gene ID: opera_contig_190201_600
Type: TC
Location: 623835 - 624839 (+)
Type: TC
Location: 623835 - 624839 (+)
Gene ID: opera_contig_190201_601
Type: TC
Location: 624843 - 625577 (+)
Type: TC
Location: 624843 - 625577 (+)
Gene ID: opera_contig_190201_602
Type: pfam
Location: 625703 - 628933 (+)
Type: pfam
Location: 625703 - 628933 (+)
Gene ID: opera_contig_190201_603
Type:
Location: 629078 - 629239 (+)
Type:
Location: 629078 - 629239 (+)
Gene ID: opera_contig_190201_604
Type: TC
Location: 629607 - 631175 (+)
Type: TC
Location: 629607 - 631175 (+)
Gene ID: opera_contig_190201_605
Type: CAZyme
Location: 631215 - 632549 (+)
Type: CAZyme
Location: 631215 - 632549 (+)
Gene ID: opera_contig_190201_606
Type: TC
Location: 632589 - 633074 (+)
Type: TC
Location: 632589 - 633074 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_190201_604 | vegan > omnivore | 1.78983 | 0.01416 |